BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002E07SP1|AL424978
(1010 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1038 1984 0.0
>3x_Contig1038
Length = 5718
Score = 1984 bits (998), Expect = 0.0
Identities = 1004/1008 (99%)
Strand = Plus / Plus
Query: 1 gatcatatggccaagaaggcccaagaagcagctgacgcatcagctaactcttcgaaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gatcatatggccaagaaggcccaagaagcagctgacgcatcagctaactcttcgaaggaa 274
Query: 61 gagacttctgagaaagaagaagtacctgctgtaactgtcactgaaacatccacggctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gagacttctgagaaagaagaagtacctgctgtaactgtcactgaaacatccacggctgaa 334
Query: 121 taagtttcttcactccacawtatcagttatagacttctacatgaaattataaaagcggta 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 taagtttcttcactccacattatcagttatagacttctacatgaaattataaaagcggta 394
Query: 181 ttcctttgaaggttgaagtaatcattatttaagtctattagttacaaatttgtatattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ttcctttgaaggttgaagtaatcattatttaagtctattagttacaaatttgtatattat 454
Query: 241 gctaatataagcgatgtagtactgcatctataatggaaaaaatgggaacggtatattgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gctaatataagcgatgtagtactgcatctataatggaaaaaatgggaacggtatattgtt 514
Query: 301 gttctgagcttatagaattgttttcttccgttggaaatgttgaatcttgatttcacattg 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gttcttagcttatagaattgttttcttccgttggaaatgttgaatcttgatttcacattg 574
Query: 361 ttcccatagtataaacagcgaaagatctttgtagttggcgacgtacactaatcttttgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ttcccatagtataaacagcgaaagatctttgtagttggcgacgtacactaatcttttgtg 634
Query: 421 cacccacaaaactgtccactgttactttaattgctctgtctaaatcccatgaggaaacga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 cacccacaaaactgtccactgttactttaattgctctgtctaaatcccatgaggaaacga 694
Query: 481 attctgataatctcattttcgcgaaggcttcagcaattcttaagatagattccaaatgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 attctgataatctcattttcgcgaaggcttcagcaattcttaagatagattccaaatgac 754
Query: 541 gaacggtgatcgggaatgaaccagtagtgacactctctcgtctcaaatcagcataaaccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 gaacggtgatcgggaatgaaccagtagtgacactctctcgtctcaaatcagcataaaccc 814
Query: 601 tactcactttgtccatatccatttgatgtaacttagggtaaactttagttcttgcgtaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 tactcactttgtccatatccatttgatgtaacttagggtaaactttagttcttgcgtaat 874
Query: 661 gaatatacttcattagcatatgctgagatatgggcgaaatttcttcttctcttttacgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 gaatatacttcattagcatatgctgagatatgggcgaaatttcttcttctcttttacgaa 934
Query: 721 ggttctgcaagcgtctttgtttggcagataacggagtttcttcatcaccctccccattag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 ggttctgcaagcgtctttgtttggcagataacggagtttcttcatcaccctccccattag 994
Query: 781 gattttccgttggaacgttaccatcatcaaaatcatccagatccttgtctggatgagacc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 gattttccgttggaacgttaccatcatcaaaatcatccagatccttgtctggatgagacc 1054
Query: 841 tgatatgtgaatcaacgacgaaagatgctagccgattatcactttcttcatcaaccaaat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 tgatatgtgaatcaacgacgaaagatgctagccgattatcactttcttcatcaaccaaat 1114
Query: 901 ctcttaccacgcagaggatatcgaatcttgacaaaattkgktcagtcaaattgacatttt 960
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 1115 ctcttaccacgcagaggatatcgaatcttgacaaaattggttcagtcaaattgacatttt 1174
Query: 961 gtgataacggaagagtagagttgtaacgaccaccgatcgggttggcgg 1008
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1175 gtgataacggaagagtagagttgtaacgaccaccgatcgggttggcgg 1222
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7850
Number of Sequences: 1807
Number of extensions: 7850
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 1010
length of database: 10,358,551
effective HSP length: 16
effective length of query: 994
effective length of database: 10,329,639
effective search space: 10267661166
effective search space used: 10267661166
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)